SRR6576386_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576386_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	268569
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	580	0.215959399632869	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	321	0.11952235738301889	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	300	0.11170313774113916	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	298	0.11095845015619824	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	288	0.10723501223149359	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCGG	55	5.1701893E-5	42.868996	1
GTATCAA	825	0.0	41.154232	1
AACGCAG	900	0.0	37.60529	6
AGTGCGG	50	0.0017000866	37.598286	94
CAACGCA	920	0.0	36.27684	5
TCAACGC	925	0.0	36.08075	4
CTATACC	80	1.15423645E-5	35.25496	4
ATCAACG	935	0.0	35.192116	3
CATGGGT	415	0.0	35.11337	4
GTATAAG	95	9.1740003E-7	34.74645	1
AGCGTCC	55	0.0027139252	34.180264	8
ACATGGG	1545	0.0	34.07599	3
GTACATG	1560	0.0	33.855515	1
TACATGG	1560	0.0	33.748337	2
ACGCAGA	1075	0.0	31.477636	7
CCCTATA	60	0.0041524973	31.337742	2
CGCAGAG	1095	0.0	30.902702	8
TATAAGA	95	3.7381018E-5	29.688385	2
CGACGGT	80	4.772516E-4	29.373663	7
ACCGGCG	65	0.0061472566	28.921759	8