SRR6576388_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576388_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	163900
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	463	0.28248932275777916	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	247	0.15070164734594266	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	245	0.14948139109212935	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	201	0.12263575350823673	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	193	0.11775472849298353	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	185	0.11287370347773033	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	183	0.11165344722391703	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	177	0.1079926784624771	No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCG	167	0.10189139719341062	No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG	167	0.10189139719341062	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGCAT	40	5.662583E-4	46.9997	5
GTGTAAT	60	8.775535E-5	39.178364	1
ATACCAA	60	8.7913344E-5	39.166416	6
CATGGGG	540	0.0	38.296047	4
TAATACC	50	0.0016978276	37.59976	4
TGGGGGG	90	6.1475293E-7	36.555317	6
GTAATAC	65	1.4082638E-4	36.15361	3
GTACATG	990	0.0	35.141804	1
CACGAGC	55	0.0027103345	34.1816	94
TACATGG	1050	0.0	33.581455	2
GTATAAG	70	2.1730538E-4	33.581455	1
ATACTAC	70	2.176954E-4	33.571213	3
ACATGGG	1040	0.0	33.44209	3
GTATCAA	615	0.0	32.8716	1
AACGCAG	605	0.0	31.851032	6
GCAACTA	30	0.004156815	31.333132	50-51
CGCAGAG	650	0.0	30.369036	8
ATCAACG	660	0.0	29.908895	3
CAACGCA	665	0.0	29.684017	5
ACGCAGA	670	0.0	29.462496	7