SRR6576388_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576388_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	163900
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	379	0.2312385600976205	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	254	0.1549725442342892	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	243	0.14826113483831604	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	225	0.13727882855399634	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	204	0.12446613788895669	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	192	0.11714460036607688	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	174	0.10616229408175717	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	174	0.10616229408175717	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	169	0.10311165344722391	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACATG	940	0.0	40.12973	1
GTATCAA	425	0.0	39.940887	1
CATGGGT	250	0.0	37.595364	4
TACATGG	980	0.0	37.403553	2
ACATGGG	970	0.0	37.30468	3
TTATACC	80	1.153582E-5	35.245655	4
CTATTCT	55	0.002711888	34.177605	4
CATGGGG	375	0.0	33.835827	4
ATGGGTA	155	4.1836756E-11	33.350727	5
TAGGACC	85	1.7471348E-5	33.17238	4
CTAGGAC	75	3.265759E-4	31.32947	3
ATCAACG	555	0.0	30.482725	3
AACGCAG	575	0.0	30.239748	6
CAACGCA	580	0.0	29.979061	5
GAAATTC	80	4.7581512E-4	29.38034	94
TCAACGC	595	0.0	29.223288	4
ATGGGGG	145	2.6340786E-8	29.168816	5
CCCCTGT	65	0.0061426954	28.91951	8
GGTACCT	130	3.3058132E-7	28.91951	8
TAGCACT	65	0.0061426954	28.91951	4