SRR6576398_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576398_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	213636
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	536	0.2508940440749686	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	312	0.14604280177498175	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	296	0.1385534273249827	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	272	0.12731936564998408	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	254	0.11889381939373515	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	246	0.11514913216873561	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	238	0.11140444494373608	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	221	0.10344698459061206	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	220	0.10297889868748714	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTAAA	20	0.0021630826	70.47929	5
CCCGCTA	35	2.9363472E-4	53.6985	3
GTATCAA	795	0.0	43.766304	1
GTACATG	1540	0.0	39.38622	1
AACGCAG	900	0.0	38.63309	6
TACATGG	1585	0.0	38.267998	2
ACTATAC	50	0.0017013815	37.58895	3
ACATGGG	1620	0.0	37.41493	3
ATCAACG	935	0.0	36.684402	3
CAACGCA	960	0.0	35.72908	5
TCAACGC	960	0.0	35.72908	4
GTTATGT	55	0.0027066497	34.19579	1
TCTAGAC	55	0.0027159925	34.171776	3
ACGCAGA	1025	0.0	33.463333	7
CATGGGT	340	0.0	33.16672	4
CGCAGAG	1040	0.0	32.98069	8
ATGGGAC	200	0.0	32.89033	5
ATGGGAT	280	0.0	31.883486	5
TATCAAC	1095	0.0	31.775537	2
TGCCCGC	60	0.0041451664	31.34614	1