SRR6576402_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576402_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	532753
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1523	0.2858735661741933	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	843	0.15823467911020678	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	765	0.14359374794698482	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	737	0.13833802906787948	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	707	0.1327069016974095	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	665	0.1248233233787515	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	567	0.10642830730188287	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	558	0.10473896909074186	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1455	0.0	40.38297	1
GTACATG	3210	0.0	39.83044	1
ACATGGG	3155	0.0	39.46705	3
TACATGG	3270	0.0	38.67199	2
GTATAGG	110	1.7898856E-9	38.45927	1
CATGGGG	1480	0.0	37.463505	4
GGTACCT	410	0.0	35.527607	8
TAGATCG	55	0.002719072	34.173183	5
CATGGGT	735	0.0	33.2433	4
TCAACGC	1780	0.0	32.733303	4
CAACGCA	1780	0.0	32.469326	5
ATGGGTA	500	0.0	31.951927	5
AACGCAG	1810	0.0	31.931158	6
ATCAACG	1865	0.0	31.241436	3
GGGTACC	485	0.0	30.033648	7
TATAACG	80	4.771419E-4	29.381367	2
GTCTATA	65	0.006147551	28.92663	1
ATGGGGC	525	0.0	28.640383	5
ACGCAGA	2040	0.0	28.100742	7
ATGGGAG	475	0.0	27.698263	5