SRR6576402_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576402_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	532753
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1523	0.2858735661741933	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	731	0.1372118035937855	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	725	0.1360855781196915	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	715	0.13420853566286817	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	690	0.12951592952080984	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	631	0.11844137902555218	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	568	0.10661601154756518	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	562	0.1054897860734712	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	543	0.10192340540550687	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	534	0.10023406719436587	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAACG	50	4.561316E-7	56.395832	2
TAACGCA	50	3.0102168E-5	46.992115	4
GTATCAA	1355	0.0	41.67923	1
GTACATG	3370	0.0	36.44923	1
TACATGG	3400	0.0	36.353195	2
ACATGGG	3505	0.0	35.260845	3
CATGGGT	1015	0.0	33.33431	4
TCAACGC	1680	0.0	33.28608	4
CATGGGG	1580	0.0	33.01345	4
CAACGCA	1745	0.0	31.776901	5
ATCAACG	1765	0.0	31.68307	3
AACGCAG	1745	0.0	31.507605	6
ATGGGTA	690	0.0	28.603895	5
ATAGTAC	100	5.324329E-5	28.19527	3
GGTACCT	635	0.0	28.139757	8
CTATATC	120	5.8430833E-6	27.41207	3
GCGGTAC	70	0.00877451	26.893028	1
TATCAAC	2115	0.0	26.886904	2
ACGCAGA	2060	0.0	26.687191	7
CGCAGAG	2130	0.0	25.829542	8