SRR6576413_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576413_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	293712
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	890	0.30301792231846164	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	555	0.1889606144794901	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	488	0.16614915291169582	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	458	0.15593506564253418	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	449	0.1528708394617857	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	415	0.14129487389006917	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	395	0.13448548237729477	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	390	0.13278313449910117	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	371	0.12631421256196546	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	352	0.11984529062482975	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	320	0.1089502642043907	No Hit
GATCAAAACCAACCCGGTGAGCTCCCTCCCGGCTCCGGCCGGGGGTCGGG	297	0.10111946396470012	No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG	297	0.10111946396470012	No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCG	295	0.10043852481342266	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	294	0.10009805523778395	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	610	0.0	43.157078	1
ATAGACG	45	0.0010141671	41.765675	3
AGTAATA	70	4.616426E-6	40.29462	2
TACATGG	1660	0.0	37.948147	2
GTACATG	1665	0.0	37.834187	1
TATATAC	50	0.0017023871	37.589104	3
ACATGGG	1700	0.0	37.589104	3
GGGTACC	340	0.0	35.930763	7
TCTACAC	105	5.102993E-8	35.79915	3
ATGGGTA	320	0.0	35.239784	5
TGGGTAC	355	0.0	34.412563	6
TAGACGT	55	0.00271759	34.171913	4
GGTATAT	70	2.178227E-4	33.57885	1
TGGGAGT	130	9.164069E-9	32.52903	6
CATGGGT	510	0.0	31.324255	4
TTATATA	60	0.004161885	31.324255	4
GGTACCT	380	0.0	30.91209	8
CATGGGA	575	0.0	29.41756	4
TATACTG	160	2.1263986E-9	29.366486	5
AACGCAG	865	0.0	29.332539	5