SRR6576429_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576429_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	208384
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	462	0.22170608108108109	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	273	0.13100813882063883	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	254	0.12189035626535627	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	250	0.11997082309582309	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	220	0.10557432432432433	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	211	0.1012553746928747	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTAC	45	1.6074307E-5	52.23276	1
GTATCAA	710	0.0	39.726326	1
GTACATG	1530	0.0	38.71369	1
TACATGG	1565	0.0	37.847893	2
ACATGGG	1545	0.0	37.71119	3
GATATGC	50	0.0017011554	37.589535	6
CATACCC	55	0.0027156328	34.172306	4
AACGCAG	830	0.0	33.96645	6
ATCAACG	840	0.0	33.00272	3
CAACGCA	855	0.0	32.973278	5
ATGGGAG	345	0.0	32.686554	5
TCAACGC	870	0.0	32.404774	4
TATAGTC	60	0.004149136	31.339655	2
GTATAGT	60	0.004149136	31.339655	1
CATGGGT	270	0.0	31.324614	4
CATGGGG	540	0.0	31.324614	4
GTGAGTA	60	0.0041589006	31.324614	4
TCTATAC	60	0.0041589006	31.324614	3
ACGCAGA	950	0.0	29.181353	7
GATTTAT	65	0.0061367108	28.928913	1