SRR6576458_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576458_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	414800
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1007	0.24276759884281582	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	591	0.14247830279652843	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	572	0.13789778206364514	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	558	0.13452266152362582	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	515	0.12415621986499518	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	479	0.11547733847637415	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	473	0.11403085824493733	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	458	0.11041465766634523	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	439	0.1058341369334619	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	423	0.10197685631629702	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	422	0.10173577627772419	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	416	0.10028929604628738	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGAAT	35	2.935505E-4	53.713593	94
GTATCAA	880	0.0	44.37176	1
TTAGGAC	45	0.0010132698	41.77724	3
CGAACTC	60	8.80248E-5	39.17561	2
TCAACGC	975	0.0	39.045654	4
ATCAACG	1005	0.0	37.88011	3
TACATGG	1930	0.0	37.75473	2
CAACGCA	1015	0.0	37.50691	5
GTACATG	1980	0.0	37.06557	1
ACATGGG	1960	0.0	36.688305	3
AACGCAG	1065	0.0	35.30471	6
TAATACC	80	1.1569688E-5	35.249546	4
GTACTAG	60	0.004138613	31.363176	1
AAACGCA	60	0.0041582054	31.332932	3
TTAAGTA	120	1.6481681E-7	31.332932	4
GGTAATC	95	3.740726E-5	29.690989	2
ATGGGCG	95	3.7468875E-5	29.683828	5
ATAATAC	95	3.7468875E-5	29.683828	3
ACGCAGA	1275	0.0	29.489819	7
CCGAACT	80	4.749126E-4	29.402979	1