SRR6576460_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576460_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	430869
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	970	0.22512643053921264	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	686	0.15921312510298954	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	555	0.1288094525250134	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	531	0.12323931403744526	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	512	0.11882962106812048	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	473	0.10977814602582223	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	469	0.10884978961122754	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	469	0.10884978961122754	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	433	0.10049458187987531	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACATG	2370	0.0	39.86509	1
GTCTTAG	240	0.0	39.170925	1
TACATGG	2395	0.0	38.860172	2
ACATGGG	2475	0.0	37.21129	3
TCTTAGG	250	0.0	35.72388	2
GTATCAA	1345	0.0	35.297516	1
GTACTAA	80	1.1561082E-5	35.253834	1
AGGTATA	160	1.8189894E-12	35.241558	6
CATGGGG	1080	0.0	32.195988	4
TAGGTAT	215	0.0	30.59732	5
AACGCAG	1525	0.0	30.196043	6
TTAGGTA	205	1.8189894E-12	29.797739	4
TCAACGC	1570	0.0	29.03126	4
ATCAACG	1605	0.0	28.39818	3
CAACGCA	1615	0.0	28.222342	5
CATGGGT	700	0.0	28.193247	4
CTTAGGT	205	3.6379788E-11	27.505606	3
GTATAGT	325	0.0	27.467154	8
CTATAAG	120	5.82714E-6	27.419647	1
CGCAGAG	1700	0.0	27.084484	8