SRR6576460_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576460_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	430869
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	895	0.20771974776556215	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	641	0.14876911543879925	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	629	0.1459840461950152	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	522	0.12115051210460719	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	485	0.11256321526960632	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	466	0.10815352230028152	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	465	0.10792143319663286	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	439	0.10188711650176735	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	436	0.10119084919082133	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTAGGT	185	0.0	38.108814	3
GTATCAA	1360	0.0	37.761875	1
TACATGG	2515	0.0	34.016506	2
TAGGTAT	180	0.0	33.945076	5
GTACATG	2535	0.0	33.82668	1
GTCTAGG	100	1.3816389E-6	32.981014	1
ACATGGG	2580	0.0	32.24478	3
GTCTTAG	250	0.0	32.0387	1
TTAGGTA	200	0.0	30.550566	4
CTAATAG	95	3.7464168E-5	29.68476	3
AACGCAG	1675	0.0	29.459812	6
ATCAACG	1695	0.0	29.392876	3
CATGGGG	1160	0.0	29.172956	4
TGGGTAC	360	0.0	28.719421	6
GGGTACC	360	0.0	28.719421	7
GTATAGT	280	0.0	28.552814	8
CAACGCA	1730	0.0	28.526539	5
TCAACGC	1730	0.0	28.526539	4
TATTATC	420	0.0	27.979958	2
AGGTATA	240	0.0	27.413992	6