SRR6576461_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576461_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	280117
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	630	0.22490602141248123	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	526	0.18777867819518274	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	407	0.1452964297061585	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	346	0.12351981493447381	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	318	0.11352399176058575	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	309	0.11031104859755031	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	305	0.10888307385842344	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	303	0.10816908648886002	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	291	0.10388516227147941	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	995	0.0	42.15187	1
GGTACCT	215	0.0	41.5337	8
ATGGGTA	295	0.0	39.829376	5
GTACATG	2115	0.0	38.769375	1
TACATGG	2195	0.0	37.47046	2
ACATGGG	2200	0.0	37.17167	3
GGTACAC	65	1.4109991E-4	36.152813	3
TATAAGC	70	2.1811677E-4	33.570473	3
CATGGGA	1030	0.0	33.30973	4
GGGTACC	270	0.0	33.07313	7
TCAACGC	1275	0.0	32.069675	4
ATCAACG	1290	0.0	32.061104	3
CATGGGT	530	0.0	31.92362	4
AACGCAG	1285	0.0	31.454357	6
ATGGGAG	435	0.0	31.332441	5
CAACGCA	1310	0.0	31.212854	5
ATGGGAT	260	0.0	28.92225	5
CATGGGG	800	0.0	28.199198	4
TGGGTAC	305	0.0	27.736916	6
TTAAGAC	120	5.8238147E-6	27.415886	3