SRR6576462_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576462_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	253306
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	514	0.20291663047855166	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	443	0.17488729047081397	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	388	0.15317442145073548	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	331	0.1306719935571996	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	304	0.1200129487655247	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	296	0.1168547132716951	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	285	0.1125121394676794	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	264	0.10422177129637672	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1180	0.0	39.826492	1
GTACATG	2120	0.0	35.46812	1
ATTCGCG	40	1.1597393E-5	35.23949	80-81
CAATTCG	40	1.1597393E-5	35.23949	78-79
AATTCGC	40	1.1597393E-5	35.23949	78-79
TACATGG	2170	0.0	35.084023	2
ACATGGG	2170	0.0	34.42752	3
ATTATAC	125	6.2445906E-9	33.82991	3
CATGGGG	885	0.0	32.916737	4
GAGTGCA	100	1.4086945E-6	32.89019	9
ATGGGGA	475	0.0	32.642895	5
TCAACGC	1435	0.0	32.415417	4
ATCAACG	1440	0.0	32.302864	3
AACGCAG	1430	0.0	32.200188	6
CATGGGT	450	0.0	31.32399	4
CAACGCA	1510	0.0	30.805382	5
ATAATAC	125	2.3570465E-7	30.07103	3
GTCCTAT	95	3.743435E-5	29.68122	1
ACGCAGA	1560	0.0	29.516836	7
TATCAAC	1635	0.0	29.030712	2