SRR6576474_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576474_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	321372
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	739	0.2299515825896469	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	479	0.14904845475025827	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	466	0.14500329835828882	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	397	0.12353285289322032	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	388	0.12073236000647225	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	362	0.11264204722253339	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	350	0.1089080567068693	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	344	0.10704106144903726	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	340	0.10579639794381589	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	333	0.10361823680967851	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	328	0.10206240742815179	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCGAAT	25	0.0052337847	56.396824	94
TATTTCG	40	5.667804E-4	47.00467	5
TAATGTG	50	3.0027879E-5	47.004665	4
GTATCAA	950	0.0	45.6197	1
CTATTCA	55	5.2763236E-5	42.724865	9
GTACATG	2215	0.0	40.62074	1
TACATGG	2325	0.0	38.816757	2
ACATGGG	2360	0.0	37.64357	3
AACGCAG	1170	0.0	37.362686	6
ATCAACG	1210	0.0	36.127556	3
TCAACGC	1205	0.0	35.88738	4
CAACGCA	1220	0.0	35.446144	5
CATGGGT	570	0.0	33.81038	4
CATGGGG	1065	0.0	31.777802	4
ATGGGTA	385	0.0	31.743414	5
ACGCAGA	1395	0.0	31.33157	7
GGTACCT	300	0.0	29.764992	8
TATGGGA	95	3.7414226E-5	29.68716	2
CGCAGAG	1460	0.0	29.61477	8
TATCAAC	1535	0.0	29.397057	2