SRR6576487_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576487_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	432884
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1130	0.2610399090749485	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	709	0.1637852172868482	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	646	0.1492316648339971	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	557	0.12867188438473123	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	548	0.12659280546289536	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	548	0.12659280546289536	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	496	0.11458034947006589	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	469	0.10834311270455828	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	469	0.10834311270455828	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	960	0.0	37.809063	1
GTATAAA	100	1.3764384E-6	32.996998	1
GTACATG	2285	0.0	32.594723	1
TACATGG	2340	0.0	31.736681	2
ACATGGG	2325	0.0	31.537111	3
TATGGGT	80	4.774572E-4	29.376518	4
GTATAAT	65	0.006062149	29.008352	1
ATGGGTA	410	0.0	28.660017	5
CATGGGG	1190	0.0	28.438444	4
ATCAACG	1295	0.0	27.947388	3
CAACGCA	1315	0.0	27.879766	5
TCAACGC	1310	0.0	27.627378	4
AACGCAG	1355	0.0	27.056747	6
TATACAG	160	6.891605E-8	26.438866	5
TATATAC	90	9.5051964E-4	26.11246	3
GTATAAG	95	0.0012810973	24.809772	1
CTTAGAC	95	0.0013028805	24.738117	3
GGGTACC	465	0.0	24.256516	7
ATATACA	180	2.153356E-7	23.501213	4
GGTACCT	460	0.0	23.498499	8