SRR6576490_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576490_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	324338
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	773	0.23833161701681582	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	470	0.1449105562715439	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	420	0.12949453964691157	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	415	0.12795293798444832	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	396	0.12209485166708804	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	388	0.11962828900714687	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	358	0.11037867903236746	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	351	0.10822043670491895	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	345	0.10637051470996307	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	334	0.10297899105254395	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	735	0.0	46.70265	1
GTACATG	2000	0.0	41.14471	1
TACATGG	2070	0.0	39.753345	2
ACATGGG	2080	0.0	39.305832	3
ATGGGTA	300	0.0	37.589024	5
CGCGGCA	25	0.0017039228	37.58902	36-37
ATCAACG	935	0.0	36.18195	3
CATGGGT	510	0.0	35.009384	4
AACGCAG	995	0.0	34.94457	6
CAACGCA	990	0.0	34.17184	5
TCAACGC	995	0.0	34.000122	4
GTATAGT	85	1.7451817E-5	33.19237	1
CATGGGA	1165	0.0	32.265255	4
GGTACCT	265	0.0	31.915207	8
ACCCTTG	165	8.54925E-11	31.324184	7
GGGTACC	275	0.0	30.754654	7
ACGCAGA	1170	0.0	29.717817	7
CATGGGC	335	0.0	29.454084	4
GTGCTAA	80	4.7600246E-4	29.38908	1
CGCAGAG	1200	0.0	29.366426	8