SRR6576490_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576490_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	324338
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	784	0.24172314067423492	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	453	0.1396691106191689	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	435	0.13411934463430125	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	412	0.12702797698697038	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	410	0.1264113363219851	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	380	0.11716172634720569	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	378	0.11654508568222041	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	370	0.11407852302227922	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	362	0.11161196036233804	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	329	0.10143738939008072	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACG	25	0.0052389163	56.382977	4
GTATCAA	980	0.0	47.065636	1
TCAACGC	1240	0.0	36.376114	4
AACGCAG	1260	0.0	36.17162	6
GTACATG	2240	0.0	35.929573	1
ATCAACG	1275	0.0	35.377556	3
TACATGG	2305	0.0	34.86253	2
CAACGCA	1310	0.0	34.432354	5
ACATGGG	2320	0.0	34.226738	3
GTTTAGA	60	0.004128315	31.377092	1
ACGGCGC	30	0.004165806	31.323877	22-23
CGCAGAG	1470	0.0	31.028166	8
ATGGGTA	425	0.0	30.955362	5
ACGCAGA	1490	0.0	30.592796	7
CATGGGT	630	0.0	29.832264	4
TATCAAC	1575	0.0	29.240124	2
CATGGGG	750	0.0	28.817968	4
GGTACCT	345	0.0	28.622126	8
ATGGGAC	235	0.0	27.991549	5
CATGGGC	310	0.0	27.282085	4