SRR6576498_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576498_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	396558
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1068	0.2693174768886266	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	623	0.15710186151836553	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	529	0.1333978888334115	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	523	0.13188486930032933	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	521	0.1313805294559686	No Hit
CCTATAAGCAGTTCTTGTATTTTTATTCACACAGGTCTGATTAAGATGAA	465	0.11725901381386833	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	426	0.10742438684883421	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	420	0.10591136731575204	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	401	0.10112013879432517	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	835	0.0	45.027946	1
GTACATG	2350	0.0	41.59816	1
TACATGG	2405	0.0	40.646847	2
ACATGGG	2345	0.0	40.27377	3
TCGTTGA	50	0.0017031616	37.588856	9
AACGCAG	1060	0.0	36.790977	6
ATCAACG	1035	0.0	36.317734	3
CATAATG	65	1.412188E-4	36.152245	2
GGGCTAG	65	1.414285E-4	36.14313	6
TCAACGC	1055	0.0	35.629246	4
CAACGCA	1095	0.0	35.185913	5
CATGGGA	925	0.0	34.541107	4
GCGTCCG	55	0.0027188223	34.171684	9
ATGGGAG	555	0.0	33.86383	5
CATGGGG	1130	0.0	33.68028	4
ATGGGTA	370	0.0	33.017235	5
GGGTACC	385	0.0	31.730852	7
GATATAG	60	0.004158626	31.331947	1
GTCTTAC	60	0.004158626	31.331947	1
ACGCAGA	1265	0.0	30.828804	7