SRR6576501_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576501_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	102617
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	327	0.31866065076936567	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	202	0.19684847539881306	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	187	0.18223101435434674	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	167	0.16274106629505833	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	159	0.15494508707134294	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	150	0.14617461044466315	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	150	0.14617461044466315	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	147	0.14325111823576991	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	143	0.13935312862391222	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	143	0.13935312862391222	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	132	0.1286336571913036	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	128	0.1247356675794459	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	128	0.1247356675794459	No Hit
GATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTAT	113	0.11011820653497958	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	110	0.10719471432608632	No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCG	109	0.1062202169231219	No Hit
GGGCGGGGACGGGCGGTGACTCGCCTCGCGGCGGACCGCCCGCCCGCTCC	108	0.10524571952015749	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	106	0.10329672471422863	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTACATA	25	5.523331E-5	75.232765	2
GTATAAG	50	4.448484E-7	56.534832	1
TATAAGG	55	5.235903E-5	42.745888	2
ATGGGAT	95	2.0767402E-8	39.59619	5
GTCCTAG	75	7.257564E-6	37.689888	1
TCCTAGG	50	0.0016911871	37.616383	2
CCTATTG	50	0.001695245	37.59805	94
TATAAGA	55	0.0026997663	34.19671	2
GTACTTT	400	0.0	32.978653	1
CATGGGT	160	5.820766E-11	32.326576	4
GTACATG	855	0.0	31.95926	1
TACATGG	880	0.0	31.525093	2
ACAATAC	75	3.2466388E-4	31.346987	3
ATGGGGG	90	2.5634974E-5	31.346985	5
ACCCTTG	60	0.0041445554	31.331709	7
GAGACGC	30	0.0041541466	31.331709	32-33
ACTTTTT	410	0.0	30.964705	3
CATGGGG	275	0.0	30.77704	4
TACTTTT	415	0.0	30.591637	2
ACATGGG	865	0.0	30.441004	3