SRR6576507_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576507_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	318031
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	697	0.21916102518307964	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	481	0.15124311780927016	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	422	0.13269146718401667	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	381	0.11979964217324728	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	369	0.11602642509692453	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	332	0.10439233911159604	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	324	0.10187686106071421	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	324	0.10187686106071421	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1035	0.0	39.51531	1
AGGGCCG	60	8.82359E-5	39.15618	5
GTACATG	2305	0.0	36.71031	1
TACATGG	2345	0.0	36.084126	2
ACATGGG	2350	0.0	35.990364	3
CATGGGG	660	0.0	34.17267	4
CACCGTC	70	2.1848953E-4	33.562443	7
ATGGGAG	470	0.0	32.991165	5
GTCCTAC	75	3.2663418E-4	31.33973	1
CACTACT	75	3.2663418E-4	31.33973	2
ACCGTGC	60	0.0041619474	31.324945	8
CATGGGA	1355	0.0	29.822275	4
AACGCAG	1365	0.0	29.259565	6
TCAACGC	1360	0.0	29.021645	4
GAGGTAC	65	0.006141435	28.928982	1
TAATAAC	65	0.006155611	28.915335	3
ATCAACG	1365	0.0	28.915335	3
CAACGCA	1395	0.0	28.2935	5
CATGGGT	645	0.0	27.68251	4
TCTAATA	70	0.0088177975	26.862627	2