SRR6576515_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576515_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	178784
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	433	0.24219169500626453	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	307	0.17171558976194737	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	238	0.13312153212815464	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	215	0.12025684625022373	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	205	0.11466350456416682	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	199	0.11130749955253266	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	188	0.10515482369787006	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	180	0.10068015034902453	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAATAGA	45	1.6087086E-5	52.22067	1
GTATCAA	425	0.0	46.44568	1
TAATAGT	45	0.0010118047	41.776535	4
GCTCTAA	45	0.0010118047	41.776535	1
AACGCAG	475	0.0	40.56721	6
CATGGGT	245	0.0	40.284515	4
ATGGGTA	165	0.0	39.8776	5
CAACGCA	485	0.0	39.730778	5
ATCAACG	490	0.0	39.325363	3
TCAACGC	490	0.0	39.325363	4
ACATGGG	915	0.0	38.523445	3
GTACATG	955	0.0	37.40203	1
TACATGG	965	0.0	37.014442	2
ACGCAGA	560	0.0	34.40969	7
GTCTAGG	55	0.0027112986	34.1808	1
TACACCG	55	0.0027112986	34.1808	5
CGCAGAG	585	0.0	33.742584	8
TAAACCA	60	0.0041522793	31.332401	4
TATACCA	60	0.0041522793	31.332401	5
TATCAAC	640	0.0	30.842833	2