SRR6576515_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576515_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	178784
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	487	0.2723957401109719	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	339	0.18961428315732953	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	314	0.17563092894218724	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	273	0.15269822802935387	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	237	0.13256219795954896	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	232	0.12976552711652048	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	198	0.11074816538392698	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	195	0.10907016287810989	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	192	0.10739216037229282	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCTAAC	25	0.005151381	56.612976	1
GGGTACC	185	0.0	45.722652	7
GTATCAA	375	0.0	42.774246	1
GTATTGG	45	9.930569E-4	41.935535	1
GGTACCT	220	0.0	40.584625	8
ACATGGG	1005	0.0	39.277504	3
ATGGGTA	180	0.0	39.160606	5
GTGTATA	50	0.0016670189	37.74198	1
ATGGGGG	200	0.0	37.59418	5
GTACATG	1090	0.0	37.222595	1
TACATGG	1105	0.0	35.722977	2
CATGGGG	485	0.0	34.8812	4
CTGATGT	55	0.002712961	34.17653	4
TCAACGC	470	0.0	33.99474	4
AACGCAG	485	0.0	32.943356	6
ATCAACG	480	0.0	32.3075	3
CAACGCA	500	0.0	31.955055	5
CATGGGA	370	0.0	31.751842	4
GCGGTAT	60	0.00407575	31.451649	1
GTACCTG	270	0.0	31.328487	9