SRR6576517_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576517_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	290600
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	770	0.2649690295939436	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	539	0.18547832071576048	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	404	0.13902271163110805	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	391	0.13454920853406743	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	370	0.12732278045423262	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	354	0.12181693048864418	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	339	0.11665519614590503	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	305	0.1049552649690296	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	301	0.10357880247763249	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	297	0.10220233998623537	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	291	0.10013764624913972	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCACG	25	0.0052288943	56.40877	2
GTATCAA	695	0.0	56.13823	1
ATGGGTA	295	0.0	41.423046	5
ATCAACG	955	0.0	40.35536	3
TCAACGC	970	0.0	39.731304	4
CAACGCA	965	0.0	39.450127	5
GTACATG	1555	0.0	38.99642	1
AACGCAG	995	0.0	38.260677	6
GGTACCT	275	0.0	37.59938	8
TACATGG	1635	0.0	37.088337	2
ACATGGG	1625	0.0	37.020927	3
GGGTACC	295	0.0	36.643463	7
TGGGTAC	310	0.0	36.386497	6
CATGGGT	480	0.0	36.22857	4
GTGTTAT	55	0.002711614	34.187138	1
GTATGGG	55	0.002711614	34.187138	1
ATAGGGG	55	0.0027139033	34.181255	3
ACGCAGA	1100	0.0	34.181255	7
TATCAAC	1190	0.0	33.576653	2
CTAATAG	70	2.181214E-4	33.570873	3