SRR6576517_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576517_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	290600
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	743	0.2556779077770131	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	491	0.1689607708189952	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	490	0.1686166551961459	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	470	0.16173434273916035	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	412	0.14177563661390227	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	361	0.12422573984858913	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	340	0.1169993117687543	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	329	0.11321403991741226	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	323	0.11114934618031659	No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG	304	0.10461114934618031	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	535	0.0	63.413334	1
TTAGTCG	30	8.8208864E-5	39.165016	38-39
GTACATG	1480	0.0	38.841858	1
ATCAACG	865	0.0	38.03308	3
GTCCTAA	50	0.0016788344	37.695705	1
TAGTCGG	25	0.0017016866	37.59842	40-41
CATGGGT	480	0.0	37.206764	4
TCAACGC	885	0.0	37.173576	4
ACATGGG	1520	0.0	37.1037	3
CAACGCA	905	0.0	36.352062	5
AACGCAG	915	0.0	35.95477	6
TACATGG	1565	0.0	35.736515	2
TATCAAC	1010	0.0	33.03821	2
ACGCAGA	1105	0.0	29.772501	7
GTGTTAT	95	3.6783407E-5	29.759768	1
ATGGGTA	305	0.0	29.277454	5
ATAGTAC	115	4.183594E-6	28.607492	3
CGCAGAG	1155	0.0	28.483648	8
CATGGGG	815	0.0	28.25648	4
TAGTACC	100	5.31157E-5	28.198814	4