SRR6576521_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576521_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1166395
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2743	0.23516904650654366	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	1633	0.14000402950972868	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	1378	0.11814179587532525	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1373	0.11771312462759186	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	1357	0.11634137663484496	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1281	0.10982557366929727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2110	59.710712	1
ATCAACG	2885	42.518982	3
GGTATCA	800	42.309937	1
TCAACGC	2925	42.0982	4
CAACGCA	2940	42.043278	5
AACGCAG	3065	40.63531	6
TATCAAC	3545	35.274857	2
GTACATG	5805	34.418076	1
TACATGG	5875	34.007988	2
ACATGGG	5765	33.99577	3
ACGCAGA	3725	33.435493	7
CGCAGAG	3900	31.814674	8
CATGGGG	3395	29.209951	4
ATGGGTA	1200	28.982685	5
CATGGGT	1695	28.837114	4
GTATATA	335	28.066294	1
GCAGAGT	4675	26.641115	9
TGGGTAC	1270	24.05458	6
GGTACCT	1255	23.967592	8
GGGTACC	1305	23.40944	7