SRR6576535_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576535_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	181735
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	538	0.296035436212067	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	307	0.1689272842325364	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	258	0.1419649489641511	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	257	0.14141469722397998	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	234	0.12875890720004401	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	220	0.12105538283764823	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	218	0.11995487935730596	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	215	0.11830412413679257	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTAG	55	8.663883E-7	51.362957	1
GTGGTCG	20	5.676316E-4	46.992016	90-91
GGGTTAG	45	0.0010125465	41.770683	7
GCTACAC	60	8.8035755E-5	39.16002	3
CATGGGT	300	0.0	39.160015	4
ATGGGTA	200	0.0	37.593613	5
TATACAG	50	0.0016996763	37.593613	5
TAATGCG	25	0.0017019153	37.593613	18-19
GGTACCT	235	0.0	36.023624	8
ACATGGG	1120	0.0	35.244015	3
ATTATAC	80	1.1546395E-5	35.24401	3
ACCATAT	55	0.0027023086	34.20425	8
TACATGG	1185	0.0	34.103916	2
GTACATG	1165	0.0	33.94805	1
GTACCTG	250	0.0	33.86221	9
GGGTACC	240	0.0	33.28602	7
CGCCTGT	60	0.004116256	31.388477	1
GGTTAGC	60	0.004138533	31.353897	8
TGGGAGT	90	2.5850148E-5	31.328012	6
TGGGTAC	260	0.0	30.725552	6