SRR6576556_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576556_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	441936
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1199	0.27130625248904816	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	722	0.16337207197422252	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	713	0.16133557800224468	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	610	0.13802903587849824	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	569	0.12875167445059918	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	546	0.12354730096665581	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	535	0.12105825277868287	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	528	0.11947431302270012	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	508	0.11494877086274935	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	490	0.11087578291879367	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	485	0.10974439737880598	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	482	0.10906556605481336	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	462	0.1045400238948626	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	443	0.10024075884290937	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	985	0.0	53.447094	1
TAGACGC	45	0.0010133315	41.77733	4
AACGCAG	1375	0.0	38.283222	6
GTACATG	2265	0.0	37.769867	1
TACATGG	2270	0.0	37.686672	2
ATCAACG	1370	0.0	37.393753	3
TCAACGC	1380	0.0	37.122787	4
ACATGGG	2325	0.0	36.386703	3
CAACGCA	1440	0.0	35.90239	5
GTACTAG	105	5.095353E-8	35.813187	1
TACGGTA	55	0.002715352	34.181446	5
ATGGGTA	430	0.0	32.79034	5
ACGCAGA	1625	0.0	32.104267	7
CATGGGT	660	0.0	32.04511	4
GGGTTAG	75	3.2725124E-4	31.332994	7
TATCAAC	1755	0.0	31.068707	2
CGCAGAG	1690	0.0	30.869488	8
GCAAACG	65	0.006147051	28.926035	1
CATGGGG	1200	0.0	28.591358	4
TGGGTAC	485	0.0	28.102789	6