SRR6576569_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576569_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	254308
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	584	0.22964279535051985	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	561	0.22059864416376992	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	530	0.20840870125988958	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	505	0.19857810214385704	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	480	0.18874750302782453	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	282	0.11088915802884691	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	276	0.10852981424099911	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	268	0.10538402252386869	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	267	0.1049907985592274	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	266	0.10459757459458609	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	262	0.10302467873602088	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	260	0.10223823080673829	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACTCG	25	0.00523353	56.3941	6
GTATCAA	660	0.0	43.614975	1
CGACGGT	50	0.0017004088	37.59607	7
AGCGATC	25	0.001702009	37.59607	86-87
CTTAGGT	175	0.0	34.90377	3
TCAACGC	795	0.0	34.876858	4
CAACGCA	825	0.0	34.74788	5
TAGGTAT	150	2.7284841E-11	34.46306	5
GGGCCGT	55	0.0027144412	34.17824	6
AACGCAG	845	0.0	33.925446	6
ATCAACG	825	0.0	33.601997	3
TTAGGTA	155	4.1836756E-11	33.35135	4
TACATGG	1245	0.0	31.707525	2
GTATATA	60	0.004073691	31.45998	1
GTACATG	1265	0.0	31.33563	1
TATGGGA	60	0.0041570733	31.330057	4
AGTCTCG	60	0.0041570733	31.330057	7
TAGTATG	60	0.0041570733	31.330057	7
ACATGGG	1290	0.0	29.866968	3
GTCTTAG	175	1.6189006E-10	29.662266	1