SRR6576574_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576574_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	711143
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1543	0.21697464504326133	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	1185	0.16663315254456557	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	936	0.13161909770608723	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	908	0.12768177427043506	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	798	0.1122137179160872	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	795	0.1117918618336959	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	791	0.11122938705717415	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	785	0.11038567489239154	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	768	0.10799515709217415	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	719	0.10110484107978283	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1465	0.0	55.638683	1
ATCAACG	1860	0.0	43.465454	3
TCAACGC	1865	0.0	43.09387	4
AACGCAG	1925	0.0	42.23899	6
CAACGCA	1925	0.0	41.506523	5
GTACATG	3285	0.0	38.582047	1
TACATGG	3350	0.0	37.602673	2
ACATGGG	3410	0.0	36.8032	3
TATCAAC	2390	0.0	34.810005	2
ACGCAGA	2420	0.0	33.402634	7
CGCAGAG	2430	0.0	33.071774	8
CGTTCGG	30	0.004162727	31.331154	44-45
CATGGGT	975	0.0	30.369255	4
CATGGGA	1680	0.0	29.09526	4
GCAGAGT	2820	0.0	28.498016	9
CATGGGG	1495	0.0	28.294336	4
GTATTAC	140	6.2270374E-7	26.923424	1
ATGGGAG	995	0.0	24.562834	5
ATGGGTA	755	0.0	23.655647	5
AGAGTAC	2545	0.0	22.89821	10-11