SRR6576604_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576604_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114478
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	276	0.24109435874141755	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	229	0.200038435332553	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	220	0.19217666276489806	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	212	0.18518842048253814	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	187	0.16335016335016334	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	162	0.14151190621778859	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	156	0.13627072450601863	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	154	0.13452366393542864	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	152	0.13277660336483865	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	144	0.12578836108247873	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	140	0.12229423994129876	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	139	0.12142070965600377	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	135	0.1179265885148238	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	131	0.11443246737364385	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	131	0.11443246737364385	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	125	0.1091912856618739	No Hit
GGGCGGGGACGGGCGGTGACTCGCCTCGCGGCGGACCGCCCGCCCGCTCC	119	0.10395010395010396	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATATAG	15	6.8870984E-4	93.99694	3
ACTAGGC	20	0.0021582714	70.4977	3
TATACCA	35	3.6183792E-6	67.14067	5
ATACCAG	30	1.3661361E-4	62.664627	6
GCCTAAT	25	0.00516172	56.571163	1
TACCAGA	45	0.0010102908	41.776417	7
TACAACA	45	0.0010102908	41.776417	7
CACTCTA	95	2.0891093E-8	39.577663	9
ATGGGGC	100	3.283276E-8	37.598778	5
CCAGACC	50	0.0016959036	37.598778	9
ATATACC	50	0.0016959036	37.598778	4
TATCCTA	25	0.0016994531	37.598778	90-91
TGAACAC	115	2.730303E-9	36.78141	5
GTACATG	1095	0.0	36.594746	1
TACATGG	1125	0.0	35.92772	2
ACACTCT	105	5.045149E-8	35.80836	8
ATGGGAG	265	0.0	35.470543	5
ACATGGG	1140	0.0	35.454987	3
TGGGGCA	55	0.0027072781	34.180706	6
GAGATCA	55	0.0027072781	34.180706	9