SRR6576609_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576609_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	176988
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	449	0.253689515673379	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	261	0.14746762492372364	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	243	0.13729744389450133	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	233	0.13164734332271114	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	229	0.12938730309399507	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	204	0.11526205166451962	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	192	0.10848193097837142	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	189	0.10678690080683437	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	189	0.10678690080683437	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	188	0.10622189074965534	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCCCG	20	0.0021625254	70.478806	5
CGATAAA	25	0.005234968	56.383045	5
GATATAT	55	8.769457E-7	51.271805	1
GTATATC	45	0.001011718	41.777027	1
CATGGGT	290	0.0	38.88486	4
TAATGCG	25	0.001702949	37.5887	18-19
ACATGGG	1265	0.0	37.142982	3
TACATGG	1330	0.0	36.39784	2
GTACATG	1380	0.0	35.079075	1
GTACAAG	70	2.177798E-4	33.57082	1
CATGGGG	490	0.0	33.561337	4
ATGCGGT	35	2.1858161E-4	33.561337	20-21
ATGGGTA	190	0.0	32.148228	5
GCGACCC	30	0.0041460004	31.350489	84-85
AACTATA	75	3.2647824E-4	31.33277	2
TGCCCGC	60	0.0041519254	31.332766	1
CTCCTAA	60	0.0041519254	31.332766	1
TCTAAAC	75	3.2702007E-4	31.323915	3
TTACGCG	30	0.0041632485	31.323915	80-81
GGTTAGC	60	0.004157675	31.323915	8