SRR6576609_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576609_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	176988
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	415	0.2344791737292924	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	264	0.1491626550952607	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	249	0.14068750423757542	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	244	0.13786245395168034	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	233	0.13164734332271114	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	231	0.13051732320835313	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	221	0.12486722263656293	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	184	0.10396185052093927	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	179	0.10113680023504418	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGGCA	135	7.2759576E-12	38.289963	5
GTGTATC	50	0.0016900996	37.636322	1
GTACATG	1310	0.0	35.553394	1
ACATGGG	1285	0.0	35.472733	3
TACATGG	1315	0.0	35.378178	2
CATGGGG	565	0.0	34.932278	4
GTATTAA	55	0.0026980177	34.21484	1
GTGTAGG	70	2.1652461E-4	33.60386	1
GTACAAG	60	0.004131977	31.363602	1
TATACTC	60	0.0041549224	31.328152	5
ATGGGGA	310	0.0	30.317568	5
CATGGGC	210	1.8189894E-12	29.090427	4
ATGGGAG	210	1.8189894E-12	29.090427	5
GTATCCC	65	0.006145262	28.918295	3
CTTTTAT	100	5.263695E-5	28.227242	1
CGTATCA	35	0.008798558	26.875484	70-71
GCCGTAT	35	0.008798558	26.875484	68-69
TATCCTT	70	0.00882331	26.852703	5
CATGGGA	600	0.0	25.062523	4
AACGCAG	845	0.0	25.025446	6