SRR6576628_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576628_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	283537
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	708	0.2497028606495801	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	390	0.1375481859510399	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	388	0.13684281063847048	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	355	0.12520411798107478	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	322	0.1135654253236791	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	316	0.1114492993859708	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	313	0.11039123641711664	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	305	0.10756973516683889	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	289	0.10192673266628341	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	285	0.10051598204114454	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACGTA	45	1.6029304E-5	52.265667	1
TGGGTTA	50	0.001700289	37.59809	6
ACGTAGC	50	0.001700289	37.59809	3
TACGTAG	65	1.4039192E-4	36.18392	2
TACATGG	1715	0.0	33.187935	2
GTACATG	1780	0.0	31.976017	1
ACATGGG	1720	0.0	31.96931	3
CATGGGT	330	0.0	29.907576	4
TACTGGT	80	4.7733224E-4	29.373512	7
ATGGGGA	385	0.0	29.297216	5
CCGTCGT	65	0.006147979	28.921612	9
CATGGGG	685	0.0	28.81606	4
GTATCAA	1000	0.0	28.223461	1
GGTACCT	270	0.0	27.85044	8
GGGTACC	270	0.0	27.85044	7
GTGTAGG	155	5.014408E-8	27.313026	1
ATGGGTA	230	5.456968E-12	26.563871	5
AACGCAG	1000	0.0	26.318666	6
CAACGCA	1060	0.0	25.272306	5
CATGGGA	875	0.0	25.244434	4