SRR6576646_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576646_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	224436
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	560	0.24951433816321802	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	387	0.1724322301235096	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	345	0.15371865476126825	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	297	0.13233171149013528	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	285	0.126984975672352	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	275	0.12252936249086599	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	270	0.12030155590012298	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	268	0.11941043326382578	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	260	0.11584594271863694	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	239	0.10648915503751627	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	233	0.10381578712862463	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	800	0.0	44.637405	1
TACATGG	1595	0.0	44.482746	2
GTACATG	1600	0.0	44.05007	1
ACATGGG	1685	0.0	41.270252	3
CATGGGT	360	0.0	39.155617	4
CATGGGG	685	0.0	39.098457	4
AACGCAG	900	0.0	38.111465	6
ATCAACG	970	0.0	35.845554	3
CAACGCA	960	0.0	35.729504	5
TCAACGC	990	0.0	35.121407	4
CTAGTCT	55	0.0027161269	34.172176	4
ACGCAGA	1040	0.0	33.432873	7
CGCAGAG	1045	0.0	33.27291	8
ATGGGGG	245	0.0	32.603043	5
CCGTAAT	30	0.0041640494	31.324495	64-65
ATGGGGA	335	0.0	30.856964	5
GCAGAGT	1130	0.0	30.354267	9
TATCAAC	1170	0.0	29.316513	2
CCTAATA	65	0.0061522364	28.914917	2
TTTGGAC	65	0.0061522364	28.914917	3