SRR6576656_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576656_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	420124
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1223	0.2911045310432158	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	714	0.16994982433757652	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	650	0.15471622663784979	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	609	0.14495720311146235	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	588	0.1399586788662395	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	550	0.13091373023202674	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	541	0.12877150555550265	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	499	0.11877445706505699	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	497	0.11829840713694052	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	460	0.109491483466786	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	446	0.10615913396997077	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	429	0.10211270958098086	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	428	0.10187468461692263	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	426	0.10139863468880617	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1060	0.0	44.929855	1
TATAGTA	55	0.0027143303	34.183678	2
ATACCGT	125	6.2445906E-9	33.841843	6
TCAACGC	1435	0.0	33.73703	4
GTATAGG	70	2.1410792E-4	33.681507	1
ATCAACG	1425	0.0	33.643936	3
CAACGCA	1485	0.0	32.284584	5
AACGCAG	1515	0.0	32.26578	6
GTACATG	2500	0.0	31.687561	1
ACATGGG	2535	0.0	31.520456	3
CATATAA	105	2.009243E-6	31.436071	1
TACATGG	2585	0.0	31.092606	2
ACGCAGA	1670	0.0	29.271055	7
ATGGGAG	390	0.0	28.92465	5
TATCAAC	1745	0.0	28.012985	2
CGCAGAG	1760	0.0	27.774239	8
CATGGGG	1070	0.0	27.674406	4
TACCGTC	155	5.0646122E-8	27.291811	7
GTATTAC	70	0.00868989	26.945204	1
GTTAGAC	105	7.407814E-5	26.858604	3