SRR6576662_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576662_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	377586
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1120	0.2966211670983564	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	688	0.18221014550327608	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	589	0.1559909530544035	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	576	0.15254802879344043	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	484	0.12818271863893257	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	483	0.12791787831116622	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	458	0.12129687011700645	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	438	0.11600006356167866	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	427	0.11308681995624839	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	426	0.11282197962848199	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	390	0.10328772782889196	No Hit
GATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTAT	379	0.10037448422346167	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1045	0.0	45.003857	1
GTACATG	2385	0.0	42.000767	1
ACATGGG	2465	0.0	40.796	3
TACATGG	2485	0.0	40.499847	2
TCAACGC	1230	0.0	37.440506	4
AACGCAG	1285	0.0	36.930183	6
CATGGGA	1305	0.0	36.72911	4
ATCAACG	1280	0.0	36.345108	3
CAACGCA	1285	0.0	36.198895	5
TCCGACC	55	0.0027188377	34.171227	8
ATGGGTA	420	0.0	32.44232	5
AGATCGT	30	0.0041664024	31.323622	10-11
GGCGTTA	30	0.0041664024	31.323622	42-43
TCCGTTG	30	0.0041664024	31.323622	36-37
CATGGGT	680	0.0	31.097418	4
ATGGGAT	505	0.0	30.703352	5
CGCAGAG	1545	0.0	30.411282	8
ACGCAGA	1550	0.0	30.31318	7
CATGGGG	725	0.0	29.815395	4
CCGACCA	65	0.0061583263	28.91411	9