SRR6576664_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576664_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	433719
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	963	0.22203315971861967	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	561	0.12934642014760708	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	524	0.12081555108261341	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	509	0.1173570906508592	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	469	0.10813452949951466	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	462	0.10652058129802935	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	449	0.10352324892384239	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	438	0.10098704460722265	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1130	0.0	54.122253	1
AACGCAG	1420	0.0	43.35038	6
ATCAACG	1390	0.0	43.271816	3
CAACGCA	1420	0.0	43.01946	5
TCAACGC	1415	0.0	42.839386	4
GTAATAC	100	3.324749E-8	37.592392	3
TACATGG	2545	0.0	37.481606	2
GTACATG	2540	0.0	36.857883	1
ACGCAGA	1680	0.0	36.641396	7
ACATGGG	2585	0.0	35.992714	3
TATCAAC	1720	0.0	35.516068	2
CGCAGAG	1750	0.0	35.20009	8
GTTAGCA	165	1.8189894E-12	34.202507	9
TAATGCG	50	1.4128673E-6	32.89334	18-19
TAATACT	115	1.13655915E-7	32.689034	4
GGTTAGC	135	1.3169483E-8	31.34868	8
GGTATCA	540	0.0	30.491957	1
CATGGGA	1320	0.0	30.259026	4
CATGGGG	920	0.0	29.624437	4
GCAGAGT	2100	0.0	29.336792	9