SRR6576676_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576676_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	448383
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1146	0.2555850690146593	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	714	0.1592388649881909	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	705	0.15723165240430614	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	603	0.13448324312027887	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	596	0.1329220777772574	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	473	0.10549017246416569	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	472	0.10526714884373403	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	471	0.1050441252233024	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	469	0.10459807798243913	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	458	0.10214481815769107	No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG	457	0.10192179453725944	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1290	0.0	37.534702	1
TACATGG	2800	0.0	35.25711	2
GTACATG	2860	0.0	34.846188	1
ACATGGG	2870	0.0	34.389507	3
TACGGTG	70	2.180301E-4	33.578197	2
ATGGGTA	460	0.0	31.673239	5
GGTACCT	435	0.0	31.332663	8
AACGCAG	1610	0.0	31.235357	6
GGGTACC	445	0.0	30.62856	7
TGGGTAC	455	0.0	29.955404	6
CATGGGG	1020	0.0	29.950338	4
ATCAACG	1625	0.0	29.790133	3
CATGGGT	695	0.0	29.75476	4
CAACGCA	1715	0.0	29.32299	5
TCAACGC	1705	0.0	28.668009	4
ATGGGCG	135	4.6249443E-7	27.851257	5
GCAAACG	85	6.8015343E-4	27.652636	1
TACACCG	70	0.0088313	26.85657	5
ACGCAGA	1880	0.0	26.74943	7
CATGGGA	1455	0.0	26.487406	4