SRR6576704_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576704_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	294281
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	742	0.2521399614654021	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	440	0.14951695828137052	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	387	0.13150696103384182	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	381	0.12946809342091403	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	355	0.1206330004315603	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	323	0.10975903982927881	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	315	0.10704054967870845	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	314	0.10670073840988714	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	307	0.10432205952813807	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	307	0.10432205952813807	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCGCTA	30	1.3713862E-4	62.649	3
CCGCTAA	40	5.6776847E-4	46.986744	4
GTATCAA	760	0.0	42.04792	1
CTAGTAC	45	0.0010141312	41.766	3
CGCTAAA	50	0.0017023273	37.589394	5
TGGGTAC	305	0.0	33.892082	6
AGACCGT	70	2.1846849E-4	33.56196	6
GTACATG	1765	0.0	33.548645	1
CATGGGT	590	0.0	33.448193	4
TACATGG	1780	0.0	33.265934	2
GGGTACC	315	0.0	32.81614	7
ATGGGTA	330	0.0	32.74834	5
AACGCAG	1015	0.0	32.40465	6
ATCAACG	1005	0.0	32.259556	3
ACATGGG	1810	0.0	32.189816	3
GGTACCT	325	0.0	31.806412	8
ACCGTGC	60	0.0041617383	31.3245	8
TCAACGC	1035	0.0	31.324497	4
CAACGCA	1065	0.0	30.883308	5
GCAAACG	65	0.0061501972	28.919834	1