SRR6576731_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576731_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	355988
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	791	0.2221985010730699	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	525	0.14747688124318797	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	500	0.14045417261256	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	460	0.12921783880355517	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	449	0.12612784700607885	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	381	0.1070260795307707	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	378	0.10618335449509533	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	362	0.10168882097149343	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	985	0.0	52.017464	1
CCGCTAA	40	5.679268E-4	46.986797	4
GTACTAG	65	2.7767946E-6	43.390713	1
CGCTAAA	45	0.001014413	41.766045	5
AACGCAG	1235	0.0	40.328747	6
ATCAACG	1250	0.0	40.2207	3
CAACGCA	1265	0.0	39.74377	5
TCAACGC	1275	0.0	39.432056	4
ACATGGG	2195	0.0	39.173504	3
GTACATG	2225	0.0	38.66161	1
TACATGG	2265	0.0	37.978848	2
CCCGCTA	50	0.0017027981	37.589436	3
CATGGGG	770	0.0	35.39265	4
GCAAACG	80	1.155292E-5	35.254955	1
CGCAGAG	1435	0.0	35.03545	8
ACGCAGA	1425	0.0	34.951584	7
CATGGGA	1125	0.0	34.248158	4
TATCAAC	1485	0.0	33.87008	2
ATGGGAG	505	0.0	31.634676	5
CAAACGC	90	2.5864472E-5	31.337736	2