SRR6576731_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576731_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	355988
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	780	0.21910850927559355	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	543	0.15253323145724013	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	491	0.1379259975055339	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	427	0.1199478634111262	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	393	0.11039697967347215	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	365	0.10253154600716877	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	362	0.10168882097149343	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	356	0.1000033709001427	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	356	0.1000033709001427	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	20	5.679437E-4	46.992977	78-79
GTACATG	2140	0.0	38.069866	1
GTATCAA	945	0.0	37.873093	1
TACATGG	2150	0.0	37.59438	2
ACATGGG	2200	0.0	36.953568	3
GTATTAT	120	4.110916E-9	35.319153	1
CATGGGA	1085	0.0	33.349854	4
ATAAGAC	85	1.7531876E-5	33.171513	3
CGGCTTA	30	0.0041629705	31.328653	18-19
AACGCAG	1220	0.0	30.044691	6
CATGGGG	875	0.0	29.538443	4
ATAGATC	80	4.7785102E-4	29.370611	3
CTAGTAC	80	4.7785102E-4	29.370611	3
ATGGGAG	555	0.0	28.78849	5
ATCAACG	1230	0.0	28.272196	3
TCAACGC	1260	0.0	27.97201	4
CAACGCA	1280	0.0	27.90208	5
GGGTACC	290	0.0	27.547607	7
CATGGGT	555	0.0	27.09505	4
ATGGGTA	350	0.0	25.510473	5