SRR6576738_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576738_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	354335
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	775	0.21871957328516797	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	740	0.20884191513680556	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	474	0.13377171320925113	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	431	0.1216363046269773	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	417	0.11768524136763231	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	415	0.11712080375915447	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	396	0.11175864647861486	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	394	0.111194208870137	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	368	0.10385651995992493	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGCGC	25	0.005236979	56.38933	3
GTATCAA	1115	0.0	47.68384	1
TACATGG	2525	0.0	42.251434	2
ACATGGG	2530	0.0	41.97625	3
GTACATG	2565	0.0	41.822994	1
CATGGGT	590	0.0	41.41589	4
ATCAACG	1425	0.0	38.582172	3
AACGCAG	1405	0.0	38.462475	6
TCAACGC	1460	0.0	37.013542	4
CAACGCA	1465	0.0	36.88722	5
CATGGGG	800	0.0	35.830723	4
GGTACCT	295	0.0	35.068962	8
GGGTACC	300	0.0	34.460144	7
ATGGGTA	355	0.0	34.416023	5
TGGGTAC	315	0.0	34.310966	6
TCTAGAC	70	2.18439E-4	33.56508	3
CGCAGAG	1680	0.0	32.469154	8
CATGGGA	1425	0.0	32.316692	4
ACGCAGA	1695	0.0	32.159107	7
TATCAAC	1710	0.0	31.88151	2