SRR6576744_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576744_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	117771
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	238	0.20208710123884488	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	195	0.16557556614107038	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	135	0.1146292380976641	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	133	0.11293102716288392	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	131	0.1112328162281037	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	119	0.10104355061942244	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	118	0.10019444515203234	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	118	0.10019444515203234	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTAG	20	0.0021557459	70.51976	1
TACTAGG	30	1.3670548E-4	62.657604	2
GGTACCT	125	0.0	48.914494	8
ATGGGTA	135	0.0	48.733692	5
CATACTG	40	5.659891E-4	46.993202	5
GTACATG	1035	0.0	44.969128	1
CATGGGT	255	0.0	44.2289	4
ACATGGG	1095	0.0	43.34533	3
TACATGG	1080	0.0	43.077103	2
ATTGCAA	45	0.0010109653	41.771736	6
GGGTACC	160	0.0	38.181976	7
TAATTGC	50	0.0016970335	37.594563	4
GTGTAAG	65	1.4034781E-4	36.163982	1
CATGGGA	725	0.0	35.001835	4
ATGGGAG	285	0.0	34.62657	5
GTACCTG	165	1.8189894E-12	34.205936	9
AATTGCA	55	0.0027090781	34.176872	5
ACTGCGA	185	0.0	33.036285	94
CATGGGG	290	0.0	32.409103	4
GTATCAA	525	0.0	32.237606	1