SRR6576746_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576746_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106283
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	289	0.2719155462303473	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	177	0.16653651101305006	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	157	0.14771882615281842	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	153	0.1439552891807721	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	153	0.1439552891807721	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	146	0.137369099479691	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	124	0.11666964613343621	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	121	0.11384699340440145	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	119	0.11196522491837828	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	110	0.10349726673127406	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGTAC	20	0.0021593662	70.485176	1
CACTAGG	45	0.001010847	41.768993	2
GGGTACC	115	6.002665E-11	40.860973	7
ATGGGTA	130	5.456968E-12	39.760868	5
CATGGGT	175	0.0	37.592094	4
GGTACCT	125	1.4733814E-10	37.592094	8
TACATGG	900	0.0	37.06998	2
ATGGGAA	250	0.0	35.71249	5
GTACATG	945	0.0	35.304745	1
TGGGTAC	135	3.3833203E-10	34.807495	6
TGCCCGC	55	0.002708768	34.17463	1
GTTCATA	55	0.002708768	34.17463	1
GTATCAA	540	0.0	33.93731	1
ACATGGG	970	0.0	33.910393	3
CATGGGA	530	0.0	33.691025	4
AACGCAG	550	0.0	33.320263	6
ACTGTGC	90	2.5757061E-5	31.326746	8
CCGGGTG	30	0.0041577	31.326744	24-25
GTCTAGG	60	0.0041484307	31.326744	1
ATCAACG	615	0.0	29.798613	3