SRR6576747_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576747_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	291493
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	533	0.182851732288597	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	521	0.17873499535151788	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	451	0.15472069655188975	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	366	0.12556047658091274	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	365	0.1252174151694895	No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG	347	0.11904230976387083	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	324	0.11115189730113587	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	321	0.1101227130668661	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	306	0.10497679189551722	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	296	0.10154617778128464	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	785	0.0	61.14998	1
CAACGCA	985	0.0	49.621105	5
TCAACGC	980	0.0	49.39471	4
ATCAACG	1000	0.0	48.406822	3
AACGCAG	1015	0.0	48.154472	6
GGTATCA	215	0.0	45.96705	1
ACGCAGA	1125	0.0	43.446033	7
CGCAGAG	1140	0.0	42.874374	8
TATCAAC	1215	0.0	39.841007	2
GCAGAGT	1350	0.0	36.553154	9
GTATAGA	60	0.004129411	31.374336	1
ATGGGTA	240	0.0	31.331274	5
GGAGCGC	90	2.5884994E-5	31.331274	6
ACATGGG	1430	0.0	31.221725	3
GTACATG	1440	0.0	31.047518	1
TACATGG	1490	0.0	29.964476	2
GCGCACC	80	4.7740678E-4	29.37307	9
AGAGTAC	1260	0.0	28.347343	10-11
GAGCGCA	100	5.31248E-5	28.198145	7
CTATAGA	135	4.6173773E-7	27.85002	4