SRR6576758_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576758_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	149407
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	350	0.2342594389821093	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	208	0.1392170380236535	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	203	0.13587047460962337	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	192	0.12850803509875708	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	184	0.12315353363630888	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	183	0.12248422095350285	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	182	0.12181490827069683	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	176	0.11779903217386065	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	169	0.11311384339421848	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	150	0.10039690242090396	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGCTAA	20	1.835335E-5	93.97222	4
GAGTATA	25	0.0052332715	56.38333	1
CGCTAAA	35	2.933507E-4	53.69841	5
CCGAACT	35	2.933507E-4	53.69841	1
CCCGCTA	40	5.669036E-4	46.98611	3
TAGGCAT	55	5.2701515E-5	42.714645	5
GTATCAA	475	0.0	42.534794	1
TATATAC	60	8.802573E-5	39.155094	3
GGGTTAG	50	0.0016997583	37.588886	1
GGGTACC	115	2.748493E-9	36.77174	7
GGTACCT	105	5.0746166E-8	35.79894	8
ATCAACG	610	0.0	32.351093	3
CAACGCA	615	0.0	32.088074	5
TCAACGC	615	0.0	32.088074	4
TACATGG	875	0.0	31.682062	2
GTACATG	880	0.0	31.50205	1
TGCGGAC	30	0.004155301	31.334562	26-27
TGCCCGC	60	0.0041555166	31.324076	1
ACATGGG	885	0.0	30.793158	3
AACGCAG	650	0.0	30.360258	6