SRR6576758_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576758_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	149407
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	380	0.25433881946629006	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	373	0.2496536306866479	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	208	0.1392170380236535	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	201	0.13453184924401132	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	190	0.12716940973314503	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	185	0.12382284631911489	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	177	0.11846834485666669	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	167	0.11177521802860642	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	167	0.11177521802860642	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	158	0.10575140388335218	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATGCC	25	0.005230543	56.390762	4
GTATCAA	530	0.0	45.38609	1
GTATATG	55	5.1526054E-5	42.878128	1
AATCCGT	25	0.0017013807	37.59384	70-71
ATTATGG	50	0.0016986585	37.59384	3
TATCCTG	100	3.2985554E-8	37.59384	5
ATCAACG	675	0.0	36.89766	3
CAACGCA	680	0.0	36.626354	5
TTATCCT	105	5.068614E-8	35.803658	4
AACGCAG	690	0.0	35.41449	6
GTACAAG	80	1.1244127E-5	35.374454	1
TCAACGC	705	0.0	35.327545	4
GGTATCA	265	0.0	33.81709	1
TCTTAGG	70	2.178046E-4	33.565933	2
GTACATG	735	0.0	32.727386	1
TACATGG	735	0.0	32.606903	2
ACATGGG	765	0.0	31.942482	3
CGCAGAG	760	0.0	31.53431	8
ATATGAT	60	0.004152839	31.3282	3
GAGATAG	60	0.004152839	31.3282	2