SRR6576759_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576759_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	370411
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	887	0.2394637308287281	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	555	0.1498335632581106	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	521	0.14065457019364977	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	497	0.13417528097167739	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	467	0.12607616944421196	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	467	0.12607616944421196	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	414	0.11176773907902303	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	395	0.1066383017782949	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	395	0.1066383017782949	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	379	0.10231877563031334	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	371	0.10015901255632258	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGCTAA	20	1.8364542E-5	93.99785	4
CCCGCTA	30	1.3700961E-4	62.665226	3
GTATCAA	980	0.0	46.525623	1
GCAAACG	55	5.27265E-5	42.73206	1
TGCGTAT	45	0.0010131794	41.776817	94
GTACATG	2355	0.0	39.919548	1
TACATGG	2410	0.0	39.20356	2
ACATGGG	2475	0.0	37.978924	3
CGCTAAA	50	0.0017007305	37.599136	5
ATCAACG	1295	0.0	35.203827	3
AACGCAG	1305	0.0	34.93406	6
ATGGGTA	425	0.0	34.281563	5
CATGGGT	605	0.0	34.181034	4
CAACGCA	1350	0.0	33.769592	5
TCAACGC	1360	0.0	33.52129	4
TGGGTAC	405	0.0	32.49308	6
CATGGGA	1265	0.0	31.580301	4
GGGTACC	420	0.0	30.213593	7
GGTACCT	405	0.0	30.172146	8
CATGGGG	845	0.0	30.034813	4