SRR6576762_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576762_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	239126
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	634	0.2651321897242458	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	470	0.19654909963784783	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	355	0.14845729866262974	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	351	0.14678454036783956	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	291	0.12169316594598664	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	258	0.10789291001396753	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	249	0.10412920385068959	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	241	0.10078368726110921	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	525	0.0	57.45596	1
GGTATCA	205	0.0	45.98229	1
ATAGACG	55	5.2550764E-5	42.74849	8
GTCCTCG	45	0.0010129975	41.772293	6
ATCAACG	790	0.0	39.26067	3
TACATGG	1415	0.0	38.85709	2
GTACATG	1410	0.0	38.775135	1
CGAAATC	25	0.0016968902	37.618668	12-13
TCAACGC	825	0.0	37.595062	4
CAACGCA	835	0.0	37.144825	5
ACATGGG	1475	0.0	36.320652	3
AACGCAG	865	0.0	35.856564	6
TATCAAC	965	0.0	32.140858	2
ATGGGAG	410	0.0	32.09335	5
AGCTACG	30	0.0041442323	31.355453	68-69
GGGTACT	60	0.0041571227	31.32922	4
CCGTATT	30	0.0041612466	31.32922	26-27
ACGCAGA	1010	0.0	30.70884	7
CATGGGA	870	0.0	30.248901	4
CGCAGAG	1055	0.0	29.41744	8