SRR6576764_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576764_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	263463
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	581	0.22052432409864006	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	572	0.21710828465477125	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	376	0.14271453676607343	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	355	0.13474377806371293	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	345	0.1309481786816365	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	312	0.11842270072078431	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	294	0.11159062183304677	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	291	0.11045194201842383	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	285	0.108174582389178	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	265	0.10058338362502514	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCACG	30	1.3702078E-4	62.65743	2
GTATCAA	1085	0.0	50.31784	1
CATGGGT	400	0.0	38.769287	4
AACGCAG	1360	0.0	38.700176	6
ATCAACG	1375	0.0	38.61976	3
TCAACGC	1410	0.0	37.661114	4
TATAACG	50	0.0017008783	37.59446	2
CAACGCA	1445	0.0	36.74891	5
GTACATG	1915	0.0	36.37363	1
TACATGG	1990	0.0	35.18577	2
ACGCAGA	1510	0.0	34.85579	7
ACATGGG	2030	0.0	34.492455	3
TACAATA	55	0.0027151876	34.17678	2
TATCAAC	1590	0.0	33.69315	2
CGCAGAG	1555	0.0	33.57038	8
ATGGGTA	275	0.0	32.467937	5
ATGGGTT	60	0.0041582137	31.328714	5
TATAGAG	60	0.0041582137	31.328714	6
GCAGAGT	1705	0.0	30.892801	9
GGTACCT	230	0.0	30.67094	8